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FlyBase Report
Synopsis of Gene Act5C
Symbol   Act5C
other Synonyms
Full name
Actin 5C
FlyBase ID
FBgn0000042
Date   21 Aug 04
GENOMIC ORGANIZATION
Chromosome arm X
Cytogenetic map 5C7
Scaffold AE003435
Recomb. map 1-

GENE PRODUCT
Proteins & Transcripts
Cytoband:5C3 X:5573168..5588450 Cytoband:5C4 X:5588450..5597046 Cytoband:5C5 X:5597046..5618878 Cytoband:5C6 X:5618878..5640709 Cytoband:5C7 X:5640709..5662541 Cytoband:5C8 X:5662541..5670745 Cytoband:5C9 X:5670745..5675646 Cytoband:5C10 X:5675646..5695561 Cytoband:5D1 X:5695561..5738037 Gene:CG12729 X:5585655..5586481 Gene:CG15764 X:5609471..5610439 Gene:CG16721 X:5620234..5623776 Gene:Act5C X:5641240..5644553 Gene:CG4020 X:5646333..5648187 Gene:CG12236 X:5648501..5653455 Gene:CG3726 X:5657553..5682046 Gene:CG12728 X:5682984..5684763 Gene:CG32756 X:5686086..5688234 Gene:CG6041 X:5688566..5690584 Gene:CG32755 X:5690627..5691813 Gene:CG6048 X:5692974..5694386 Gene:CG6067 X:5696006..5698660 Gene:CG3033 X:5611215..5613740 Gene:mof X:5614211..5617227 Gene:CG3016 X:5617372..5620209 Gene:CG3011 X:5653442..5657169 Gene:fs(1)M3 X:5698587..5704533 Gene model for Act5C
Gene region map
PolypeptidesAct5C-PA (376 aa); Act5C-PB (376 aa); Act5C+P376
TranscriptsAct5C-RA; Act5C-RB; Act5C+R; Act5C+R1.77; Act5C+R1.9; Act5C+R1.97; Act5C+RA; Act5C+RB
Sequence:     Format:
GENE ONTOLOGY
GO:Molecular function structural constituent of cytoskeleton;    
GO:Biological process cytoskeleton organization and biogenesis;    sperm individualization
GO:Cellular component actin filament
Protein domains Actin-like ATPase domain,   details...
External database links BDGP in situ   DEDB Splicing Graph   DRSC   Fly GRID   Heidelberg RNAi   NCBI GEO  
SIMILAR GENES
  --
EXPRESSION & PHENOTYPES
Expressed in embryo (anterior embryonic/larval midgut, embryonic central nervous system, suboesophageal ganglion, supraoesophageal ganglion and 2 others).   details...
Mutants affect anterior crossvein, arista, border follicle cell, eye, filopodia, macrochaeta, trichome.   details...
HELP with Synopsis
Available reports
Synopsis
Abridged report
Full report
Recent updates
Genome Annotation
Subsections
Alleles (35)
Expression & Phenotypes (13)
Map locations
Proteins & Transcripts (11)
Constructs & Insertions (56)
Genetic Interactions (5)
Gene Ontology
Stocks (15)
References (179)
Similar genes & Sequences (48)
Synonyms (34)
Attributed data (96)

Summary

D. melanogaster gene Actin 5C , abbreviated as Act5C , is reported here . It has also been known in FlyBase as anon-EST:fe2D2, anon-fe2D2, l(1)G0009, l(1)G0010, l(1)G0025, l(1)G0079, l(1)G0117, l(1)G0177, l(1)G0245, l(1)G0330, l(1)G0420 and l(1)G0486. It encodes a product with putative structural constituent of cytoskeleton involved in sperm individualization which is a component of the actin filament ; it is expressed in the embryo (anterior embryonic/larval midgut , embryonic central nervous system , posterior embryonic/larval midgut , subesophageal ganglion and 2 other listed tissues). It has been sequenced and its amino acid sequence is also available. It has been mapped cytologically to 5C7 . There are 35 recorded alleles : 12 in vitro constructs ( 1 available from the public stock centers), 22 classical mutants ( 2 available from the public stock centers) and 1 wild-type. Mutations have been isolated which are larval lethal. Act5C is discussed in 174 references (excluding sequence accessions), dated between 1980 and 2004. These include at least 3 studies of mutant phenotypes , 3 studies of wild-type function , one study of natural polymorphisms and 12 molecular studies . Among findings on Act5C function, Act5C has a role in the individualization during spermatogenesis.




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