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Drosophila genomes : NCBI BLAST
see also Washington U. BLAST

Choose Genome section, Feature type, and Blast Program:
Genome section:
Drosophila_melanogaster (euchromatin)
Drosophila_melanogaster heterochromatin
Drosophila_pseudoobscura

Feature type    
Program Use MegaBlast for blastn


Enter sequence below in FASTA format

Or load it from disk


   

The query sequence is filtered for low complexity regions by default.
Filter Low complexity Mask for lookup table only

Expect    Matrix Perform ungapped alignment

Query Genetic Codes (blastx only)
Frame shift penalty for blastx

Other advanced options:     


Graphical Overview    Alignment view
Descriptions    Alignments Color schema


Send comments to us at flybase-help AT morgan.harvard.edu
FlyBase-NG uses Argos: A Replicable Genome infOrmation System